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Comparative fluorescence hybridization to nucleic acid arrays

Patent 5830645 Issued on November 3, 1998. Estimated Expiration Date: Icon_subject November 3, 2015. Estimated Expiration Date is calculated based on simple USPTO term provisions. It does not account for terminal disclaimers, term adjustments, failure to pay maintenance fees, or other factors which might affect the term of a patent.

Patent References

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Methods for chromosome-specific staining Patent #: 5447841
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Inventors

Assignee

Application

No. 353018 filed on 12/09/1994

US Classes:

435/6, Involving nucleic acid382/128, Biomedical applications382/129, DNA or RNA pattern reading435/91.2, Acellular exponential or geometric amplification (e.g., PCR, etc.)536/24.3, Probes for detection of specific nucleotide sequences or primers for the synthesis of DNA or RNA536/24.33, Primers536/26.6Labelled (e.g., tagged with radioactive tracer, fluorescent marker, intercalator, etc.)

Examiners

Primary: Jones, W. Gary
Assistant: Rees, Dianne

Attorney, Agent or Firm

Foreign Patent References

  • WO 93/18186 WO 09/13/1993
  • WO 95/35505 WO 12/13/1995

International Classes

C12W 001/68
C12P 019/34
C07H 021/04

Abstract

The present invention provides methods of determining relative copy number of target nucleic acids and precise mapping of chromosomal abnormalities associated with disease. The methods of the invention use target nucleic acids immobilized on a solid surface, to which a sample comprising two sets of differentially labeled nucleic acids are hybridized. The hybridization of the labeled nucleic acids to the solid surface is then detected using standard techniques.

Other References

  • Gray et al, Molecular Cytogenetics, diagnosis and prognosis assessment, Current Opin Biotech. 3(6) 623-31., 1992
  • Kallioniemi, Comparative Genomic Hybridization for Molecular Cytogenetic Analysis of Solid Tumors, Science 258, 818-821, 1992
  • Joos et al, Mopping and chromosome analysis; one potential of fluorescence in situ hybridization, J. of Biotechnology 35:135-153, 1994
  • Southern, EM et al, Analyzing and Comparing Nucleic Acid Sequence by hybridization Arrays of Oligonucleotides; Evaluation using experimental models, Genemics 13:1008-1017
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  • Phillips et al., Proc Annu Meet. Am Assoc. Cancer Research, 35:A3450 Abstract, 1994
  • Zucman, et al., "Rapid Isolution of Cosmids from Defined Subregions by Differential Alu-PCR Hybridization on Chromosome 22-Specific Library," Genomics 13:395-401 (1992)
  • Chumakov, et al., "Isolation of chromosome 21-specific yeast artificial chromosomes from a total human genome library," Nature Genetics 1:222-225 (1992)
  • Ross, et al., "Selection of a human chromosome 21 enriched YAC sub-library using a chromosome-specific composite probe," Nature Genetics 1:284-290 (1992)
  • WO 95/18235 (PCT/EP94/04208, filed Dec.17, 1994) Published Jul. 6, 1995 Cremer, et a
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