Purification directed cloning of peptides using carbonic anhydrase as the affinity binding segment
Patent 5595887 Issued on January 21, 1997. Estimated Expiration Date: January 21, 2014. Estimated Expiration Date is calculated based on simple USPTO term provisions. It does not account for terminal disclaimers, term adjustments, failure to pay maintenance fees, or other factors which might affect the term of a patent.
Methods are presented for producing and purifying a variable fusion polypeptide which can be purified by affinity chromatography with the binding protein partner. The variable fusion polypeptide construct has tandem coupled segments containing one or more copies of a desired peptide linked to carbonic anhydrase as the purification binding protein. In the methods, the fusion protein is expressed in a recombinant host using a recombinant vector containing a gene encoding the fusion polypeptide. Then the expressed fusion polypeptide is purified by immobilized reversible inhibitor affinity chromatography. Finally, the purified fusion polypeptide is cleaved from the desired peptides by chemical or enzymatic means and the desired peptides purified with affinity chromatography.
Other References
Whitney (1974) Anal. Biochem., 57, 467-476
Osborne et al. (1975) Anal. Biochem., 64, 297-303
Moks et al. (1987) Biochemistry, 26, 5239-5244
Nilsson et al. (1985) Nucl. Acids Res., 13(4), 1151-1162
Carter (1990) "Site-Specific Proteolysis of Fusion Proteins" in ACS Symposium Series 427, Protein Purification from Molecular Mechanisms to Large-Scale Processes', Ladish (ed.), ACS Washington DC, pp. 181-193
Hanada et al. (1988) J. Biol. Chem., 263(15), 7181-7185
Yoo et al. (1989) J. Biol. Chem., 264(29), 17078-17083
Amor-Gueret, et al., Nucleic Acids Research 18:1646 (May 1990)
Andersson, et al., Biochemical and Biophysical Research Communications, 48:670-677, (1972)
Asworth, et al., Biochemical and Biophysical Research Communications, 44:667-674 (1971)
Barlow, et al., Nucleic Acid Research, 15:2386, (1987)
Bergenhem, et al., Biochimica et Biophysica Acta, 871:55-60, (1986)
Bergenhem, et al., Comp. Biochem. Physiol., 95B:205-213, (Jan. 1990)
Boyer, et al., Annals of New York Academy of Sciences, 429:324-331, (1984)
Brady, et al., Biochem. Soc. Transactions, 184-185, (1989)
Carlsson, et al., Biochimica et Biophysica Acta, 327:515-527 (1973)
Carter, et al., FEBS Letters, 128:114-118, (Jun. 1981)
Carter, et al., Biochem. J., 120:797-808, (1970)
Carter, et al., Biochem. Soc. Trans., 6:552-553, (1978)
Curtis, J. Biol. Chem., 7:4459-4463, (Apr. 10, 1983)
Curtis, et al., Gene, 25:325-332, (1983)
Davis, et al., Sematic Cell and Mol. Genet., 13:173-178, (1987)
Dodgson, J. Appl. Physiol., 63:2134-2141, (1987)
Duff, et al., Biochemistry, 5:2009-2019, (1966)
Edwards, et al., Ann. Hum. Genet., 50:41-47 (1986)
Edwards, et al., Ann. Hum. Genet., 50:123-129 (1986)
Engberg, et al., Archives of Biochemistry and Biophysics, 241:628-638, (Sep. 1985)
Erikson, et al., J. Biol. Chem., 261:6247-16248, (1986)
Eriksson, et al., Proteins: Structure, Function, and Genetics, 4:274-282, (1988)
Eriksson, et al., Proteins: Structure, Function, and Genetics, 4:283-293, (1988)
Feldstein, et al., J. Biolog. Chem., 259:5447-5453, (1984)
Fernley, et al., Biochem. J., 249:201-207, (1988)
Fernley, et al., Biochemistry, 27:2815-2820, (1988)
Ferrell, et al., Biochimica et Biophysica Acta, 533:1-11, (1978)
Fraser, et al., J. Mol. Evol., 23:294-299, (1986)
Fraser, et al., Mol. Cell. Biol., 9:3308-3313 (Aug. 1989)
Fridborg, et al., J. Mol. Biol., 25:505-516, (1967)
Furth, J. Biolog. Chem., 243:4832-4841, (1968)
Henkens, et al., Biochemistry, 21:5918-5923, (1982)
Henriksson, et al., Biochem. and Biophys. Res. Comm., 96:135-142, (Sep. 1980)
Hewett-Emmett, et al., Genetics, 105:409-420, (Oct. 1983)
Hewett-Emmett, et al., Annals New York Academy of Sciences, 429:338-358, (1984)
Holmes, Eur. J. Biochem., 78:511-520, (1977)
Holmes, J. Exp. Zool., 197:289-295, (1976)
Jones, et al., Biochimica et Biophysica Acta, 709:284-303, (1982)
Kandel, et al., Biochemical and Biophysical Research Communications, 56:568-574, (1974)
Kannan, et al., Cold Spring Harbor Symposium, 36:221-231, (1972)
Kannan, et al., Proc. Nat. Acad. Sci. USA, 72:51-55, (Jan. 1975)
Kannan, et al., FEBS Letters, 73:115-119, (Jan. 1977)
Ko, et al., Biochemistry, 16(8):1720-1725, (1977)
Koester, et al., Biochem. and Biophys. Res. Comm., 76:196-204, (1977)
Konialis, et al., Proc. Natl. Acad. Sci. USA, 82:663-667, (Feb. 1985)
Liljas, et al., Nature New Biology, 235:131-137, (Feb. 1972)
Lindskog, Biochim. et Biophys. Acta, 39:218-226, (1960)
Lloyd, et al., Ann. Hum. Genet., 49:241-251, (1985)
Lloyd, et al., Gene, 41:233-239, (1986)
Lloyd, et al., Genes & Development, 1:594-602, (1987)
Maren, et al., Ann. Rev. Pharmacol. Toxicol., 23:439-459, (1983)
McIntosh, Biochem. J., 114:463-476, (1969)
McIntosh, Biochem. J., 120:299-310, (1970)
Montgomery, et al., Nucleic Acids Research, 15:4687, (1987)
Murakami, et al., Genomics I, 159-166, (1987)
Murakami, et al., J. Biolog. Chem., 262:1382-1388, (1987)
Pocker, et al., Biochemistry, 16:5698-5707, (Dec. 1977)
Rogers, Eur. J. Biochem., 162:119-122, (1987)
Sanyal, et al., Comp. Biochem. Physiol., 73B:937-944, (1982)
Shapiro, et al., Mol. and Cell. Biol., 7:4589-4593, (Dec. 1987)
Stein, et al., J. Biolog. Chem., 253(22):8016-8018, (Nov. 1978)
Tanis, et al., J. Biolog. Chem., 245:6003-6009, (1970)
Tashian, et al., Ann. N.Y. Acad. Sci., 429:49-60, 15-194, 338-358, New York, New York, (1984)
Tashian, BioEssays 10:186-192, (Jun. 1989)
Tilander, et al., J. Mol. Biol., 12:740-760, (1965)
Venta, et al., Biochimica et Biophysica Acta, 826:195-201 (1985)
Venta, et al., J. Biol. Chem., 260:12130-12135, (1985)
Wade, et al., Proc. Natl. Acad. Sci. USA, 83:9571-9575, (Dec. 1986)
Wendorff, et al., J. Biol. Chem., 260:6129-6132, (1985)
Whitney, et al., J. Biolog. Chem., 257:12056-12059, (1982)
Yazgan, et al., Biochemistry, 11(7):1314-1318, (1972)
Yoshihara, et al., Nucleic Acids Research, 15:753-771 (1987)
Zhu, et al., J. Biol. Chem., 265:8795-8801, (May 1990)
Dicow et al. (1989) J. Neurosci. Res., 22(1), 13-19
Ford et al. (1991) Prot. Express. Purif., 2(2/3), 95-107
Greenwood et al. (1989) FEBS Lett., 244(1), 127-131
Ong et al. (1991) Eng. Microb. Technol., 13, 59-65
Germino et al. (1984) Proc. Nat. Acad. Sci., USA, 81, 4692-4696
Ullmann (1984) Gene, 29, 27-31
Marston (1986) Biochem. J., 240, 1-12
Smith et al. (1988) Gene, 67, 31-40
Steers et al. (1971) J. Biol. Chem., 246(1), 196-200
Nilsson et al. (1985) EMBO J., 4(4), 1075-1080
Ellis et al., Biochemistry, 30, pp. 10806-10813 (1991)
Murray et al., J. Biol. Chem., 266, pp. 11695-11698 (1991)
D. Smith et al., Gene, 67:3140 (1988)
R. Lerner et al., Science, 246, 1275 (Dec. 1989)
E. Ward et al., Nature, 341, 544-546 (1986)
K. Gordon et al., Bio/Technology, 5, 1183-1187 (1987)
C. Pittius et al., Proc. Natl. Acad. Sci. USA, 85, 5874-5878 (1988)
A. Clark et al., Bio/Technology, 7, 487-492 (1989)
Th. A. Buhler et al., Bio/Technology, 8, 140-143 (1990)
P. Hooykaas et al., Methods in Enzymology, 153, 305-313 (1987)
R. Shillito et al., Methods in Enzymology, 153, 313-336 (1987)
S. Cha et al., Biochemical Pharm., 24, 2187-2197 (1975)
R. Agarwal et al., Biochemical Pharm., 26, 354-367 (1977)
P. Taylor et al., Biochemistry, 9, 2638 (1970)
S. Cha et al., Biochemical Pharm., 30, 1507-1515 (1981)
J. Williams et al., Biochemical Pharm., 29, 589-595 (1980)
J. Pierce et al., Biochemistry, 19, 934-942 (1980)
W. Degrado et al., J. of Cellular Biochem., 29, 83-93 (1989)
L. Sutton et al., BBRC, 134, 386-392 (1986)
W. Scouten, Methods Enzymol., 34, 288-294 (1974)
S. Marcus, Methods Enzymol., 34, 377-385 (1974)
A. Matsura et al., Methods Enzymol., 34, 303-304 (1974)
R. Barker, Methods Enzymol., 34, 317-328 (1974)
I. Matsumoto, Methods Enzymol., 34, 329-341 (1974)
J. Johansen, Carlsberg Res. Commun., 14, 73 (1976)
G. Bethell et al., J. Biol. Chem., 254, 2572-2574 (1979)
A. Bradbury et al., Biochem. & Biophys. Res. Com., 154, 1293-1300 (1988)
K. Ohsuye et al., Biochem. & Biophys. Res. Com., 150, 1275-1281 (1988)
R. Lewis et al., Proc. Natl. Acad. Sci. USA, 82, 6490-6491 (1985)
H. Niall et al., Proc. Natl. Acad. Sci. USA, 64, 771-778 (1969)
E. Sausville et al., J. Biol. Chem., 260, 10236-10241 (1985)
J. Pierce et al., J. Biol. Chem., 199, 929-940 (1952)
D. Gearing et al., Nucl. Acids Res., 16, 9857 (1988)
J. Rivier et al., Nature, 300, 276 (1982)
A. Honegger et al., J. Biol. Chem., 261, 569-575 (1986)
H. Gregory et al., Int. J. Pept. Protein Res., 9, 107-118 (1977)
S. Jayne et al., BioEssays, 6, 263-270 (1987)
S. Beaucage et al., Tet. Letters, 221, 859-62 (1981)
A. Rosenberg et al., Gene, 56, 125-135 (1987)
R. Gunsalus et al., Proc. Natl. Acad. Sci. USA, 79, 320-324 (1982)
R. Bird et al., Science, 242, 423-425 (1988)
B. Hammarberg et al., Proc. Nat'l. Acad. Sci., 861, 4367-4371 (1989)
A. Hiatt et al., Nature, 342, 76-78 (1989)
T. Hopp et al., Bio/Technology, 6, 1204-1210 (1988)
G. Koppel, Bioconjugate Chem., 1, 13-23 (1990)
J. Luong et al., Bio/Technology, 8, 306-307 (1990)
G. Pietersz, Bioconjugate Chemistry, 1, 89-95 (1990)
H. Sassenfeld, TibTech, 8, 88-93 (1990)
M. Uhlen et al., Methods in Enzymology, 185, 129-143 (1990)
Gene, 13, issued 1981, Harley et al., pp. 347-353
Nucleic Acids Res., 8, No. 20, 1980, Doel et al. pp. 4575-4592
Proc. Natl. Acad. Sci. USA, 81, Aug. 1984, Shen, pp. 4627-4631
Tibetech, 8, Apr. 1990, Sessenfeld, pp. 89-93
Genes, 4th ed., 1990, B. Lewin, pp. 606-607
Cholesterol Metabolism, LDL and the LDL Receptor, 1990, Academic Press, N. B. Myant, pp. 124-168
Proc. Natl. Aca. Sci. USA, 84, 1987, B. J. Hwang et al, pp. 5550-5554
EMBO J., 2, 1983, F. Bouadloun et al., pp. 1351-1356
Cell, 10, 1977, P. Edelmann et al., pp. 131-137
Eur. J. Biochem., 144, 1984, K. Khazaie et al., pp. 485-489
Biochem. J., 128, 1972, R. B. Loftfield et al., pp. 1353-1356
Mol. Gen. Genet., 180, 1980, J. Parker et al., pp. 275-280
Accuracy of Molecular Processes, Chapman and Hall, 1985, R. H. Buckingham et al., pp. 83-126
Annu. Rev. Biochem., 45, 1976, A. L. Goldberg et al., pp. 747-803
Annu. Rev. Biochem., 40, 1971, P. Cuatrecasas et al., p. 259
Affinity Chromatography, 1981, William Scouten, pp. 99-102
Biochem. Soc. Trans., 1, 1973, P. O'Carra et al., p. 289
Methods Enzymol., 34, 1974, P. O'Carra et al., pp. 118-119
Carlsberg Res. Commun., 41, 1976, J. T. Johansen, pp. 73-8