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Repeat sequence chromosome specific nucleic acid probes and methods of preparing and using

Patent 5427932 Issued on June 27, 1995. Estimated Expiration Date: Icon_subject June 27, 2012. Estimated Expiration Date is calculated based on simple USPTO term provisions. It does not account for terminal disclaimers, term adjustments, failure to pay maintenance fees, or other factors which might affect the term of a patent.

Patent References

Process for amplifying, detecting, and/or-cloning nucleic acid sequences Patent #: 4683195
Issued on: 07/28/1987
Inventor: Mullis ,   et al.

Inventors

Assignee

Application

No. 858124 filed on 03/26/1992

US Classes:

435/91.2, Acellular exponential or geometric amplification (e.g., PCR, etc.)435/6, Involving nucleic acid435/810, PACKAGED DEVICE OR KIT436/501, BIOSPECIFIC LIGAND BINDING ASSAY536/22.1, N-glycosides, polymers thereof, metal derivatives (e.g., nucleic acids, oligonucleotides, etc.)536/23.1, DNA or RNA fragments or modified forms thereof (e.g., genes, etc.)536/24.3, Probes for detection of specific nucleotide sequences or primers for the synthesis of DNA or RNA536/24.31, Probes for detection of animal nucleotide sequences536/24.33Primers

Examiners

Primary: Parr, Margaret
Assistant: Marschel, Ardin H.

Attorney, Agent or Firm

Foreign Patent References

  • 9002821 WO 03/13/1990
  • 9008821 WO 08/13/1990

International Classes

C12P 019/34
C07H 021/04

Abstract

A primer directed DNA amplification method to isolate efficiently chromosome-specific repeated DNA wherein degenerate oligonucleotide primers are used is disclosed. The probes produced are a heterogeneous mixture that can be used with blocking DNA as a chromosome-specific staining reagent, and/or the elements of the mixture can be screened for high specificity, size and/or high degree of repetition among other parameters. The degenerate primers are sets of primers that vary in sequence but are substantially complementary to highly repeated nucleic acid sequences, preferably clustered within the template DNA, for example, pericentromeric alpha satellite repeat sequences. The template DNA is preferably chromosome-specific. Exemplary primers ard probes are disclosed. The probes of this invention can be used to determine the number of chromosomes of a specific type in metaphase spreads, in germ line and/or somatic cell interphase nuclei, micronuclei and/or in tissue sections. Also provided is a method to select arbitrarily repeat sequence probes that can be screened for chromosome-specificity.

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