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Cloaking System Using Optoelectronically Controlled Camouflage

A Cloaking System designed to operate in the visible light spectrum, utilizes optoelectronics and/or photonic components to conceal an object within it.

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Class 702/20 - Gene sequence determination


Subclass of Class 702 - Data processing: measuring, calibrating, or testing
Definition: Subject matter including a chemical process which determines
No. of patents: 508
Last issue date: 05/29/2012


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NumberTitleIssue Date
8190374Method and device to detect therapeutic protein immunogenicity
The present invention consists of a time-temperature indicator device that has at least one parameter set to warn when a therapeutic protein drug has had a thermal history associated with increased risk of unwanted immunological activity. The indicator device is des...
05/29/2012
8185324Method of determining initial concentration of nucleic acid in sample using real-time amplification data
Disclosed is a method of determining an initial concentration of a target nucleic acid within a sample using real-time nucleic acid amplification data. Amplification efficiencies of the target nucleic acid with respect to amplification time are obtained from signals...
05/22/2012
8185323Method of identifying exons and introns and diagnostic uses thereof
Novel introns and exons are detected by selecting for a specific group of known correlating splice junctions, then searching for unknown introns and exons within that group. Also, diseases are detected by selecting for introns and exons associated with diseases or m...
05/22/2012
8170808Methods and computer software for detecting splice variants
Methods and software products for analysis of alternative splicing are disclosed. In general the methods involve normalizing probe set or exon intensity to an expression level measurement of the gene. The methods may be used to identify tissue-specific alternative s...
05/01/2012
8165823Pamps, pathogen associated molecular patterns
A method for identifying a polypeptide which acts as an adjuvant in a host organism. The invention further provides adjuvant compositions comprising said polypeptides and optionally further comprising an antigen. ...
04/24/2012
8160819Rapid identification of proteins and their corresponding source organisms by gas phase fragmentation and identification of protein biomarkers
Embodiments of the present invention relate to the identification of proteins using laser desorption ionization mass spectrometry, the identification of source organisms from which the identified proteins are derived and a computer readable storage medium storing in...
04/17/2012
8155889Method for assessing degree of reliability of nucleic acid base sequence
Disclosed herein is a method for assessing the degree of reliability of a nucleic acid base sequence, by which a higher-accuracy assessment result of the degree of reliability can be obtained as compared to a case where the degree of reliability is assessed based on...
04/10/2012
8150634Protein-ligand NOE matching for high-throughput structure determination
A method of enhancing the throughput and applicability of NMR-based structure determination of protein-ligand complexes is disclosed. The method circumvents the need for protein sequence-specific resonance assignments and combines NMR data analysis and ligand dockin...
04/03/2012
8150635Method and an apparatus for determining nucleotide sequence, and a computer program product to be executed by the apparatus
A method for determining nucleotide sequence encompasses: injecting a solution containing a sample DNA into a chip cartridge provided with a detecting electrode, to which a probe DNA is immobilized; introducing an intercalator solution in the chip cartridge; obtaini...
04/03/2012
8145437System and method to obtain oligo-peptides with specific high affinity to query proteins
This application is based on the concept of the Proteomic Code, PC (discovered and described by Biro, 1981-2011, for review see ref 6) and making use of the biological observation, that co-locating amino acids [in interacting proteins] are coded by partially complem...
03/27/2012
8145436Method and systems for identifying micro-RNA targets and synthesizing novel micro-RNAs and uses of the same
Method of identifying a microRNA-recognition element and of generating microRNAs are disclosed. System and computer programs for performing such methods are disclosed. Recombinant nucleic acid molecule comprising a heterologous coding sequences and one or more MREs ...
03/27/2012
8126655Information processing system using information on base sequence
The present invention provides a highly-safe information processing system that is capable of effectively using nucleotide sequence information differences between individual organisms to offer semantic information useful for each individual organism while properly ...
02/28/2012
8121797T-cell epitope prediction
Epitope prediction models are described herein. By way of example, a system for predicting epitope information relating to a epitope can include a classification model (e.g., logistic regression model). The trained classification model can illustratively operatively...
02/21/2012
8116988Method for indexing nucleic acid sequences for computer based searching
The present invention relates to a method for indexing nucleic acid sequences to aid computer based searching of nucleic acid sequences by indexing a nucleotide sequence by the presence of unique Kmers in the sequence. The method of the present invention comprises u...
02/14/2012
8095323Polymorphism detection
The present invention generally provides a rapid efficient method for analyzing polymorphic or biallelic markers, and arrays for carrying out these analyses. In general, the methods of the present invention employ arrays of oligonucleotide probes that are complement...
01/10/2012
8090542Functional and hyperfunctional siRNA
Efficient sequence specific gene silencing is possible through the use of siRNA technology. By selecting particular siRNAs by rationale design, one can maximize the generation of an effective gene silencing reagent, as well as methods for silencing genes. ...
01/03/2012
8090543Computer algorithm for automatic allele determination from fluorometer genotyping device
The present invention provides methods and systems for an automated method of identifying allele values from data files derived from processed fluorophore emissions detected during the observation of fluorophore labeled nucleotide probes used in analyzing polymorphi...
01/03/2012
8068996Electronic hybridization assay and sequence analysis
An electronic hybridization assay implements a hybridization reaction, or a sequence analysis, on sequences representative of the sequences of the molecules under examination to provide an output representative of a chemical hybridization reaction. An electronic hyb...
11/29/2011
8065093Methods, systems, and compositions for classification, prognosis, and diagnosis of cancers
The present invention provides methods, systems and compositions for predicting disease susceptibility in a patient. In some embodiments, methods for the classification, prognosis, and diagnosis of cancers are provided. In other embodiments, the present invention pr...
11/22/2011
8050872System and method for rapid searching of highly similar protein-coding sequences using bipartite graph matching
An exemplary embodiment of system, computer-accessible medium and method for comparing a first genome to a second genome. For example, a first genome may be compared to a second genome by building a first library for the first genome and a second library for the sec...
11/01/2011
8032310Computer-implemented method, computer readable storage medium, and apparatus for identification of a biological sequence
A computer-implemented biological sequence identifier (CIBSI) system and method for selecting a subsequence from biological sequence data according to at least one selection parameter. The at least one selection parameter corresponds to a likelihood of returning a m...
10/04/2011
8014961Integrated systems and methods for diversity generation and screening
Integrated systems and methods for diversity generation and screening are provided. The systems use common fluid and array handling components to provide nucleic acid diversification, transcription, translation, product screening and subsequent diversification react...
09/06/2011
8005627Bioinformatic approach to disease diagnosis
A multivariate diagnostic method based on optimizing diagnostic likelihood ratios through the effective use of multiple diagnostic tests is disclosed. The Neyman-Pearson Lemma provides a mathematical basis to produce optimal diagnostic results. The method can compri...
08/23/2011
8000902Methods and compositions for selecting siRNA of improved functionality
Efficient sequence specific gene silencing is possible through the use of siRNA technology. By selecting particular siRNAs by rational design, one can maximize the generation of an effective gene silencing reagent, as well as methods for silencing genes. Methods, co...
08/16/2011
7991564Methods for high throughput genotyping
Methods for genotyping polymorphisms using allele specific probes are disclosed. A training set is used to generate a model for each polymorphism to be interrogated. The training set is used to obtain an estimate of the asymmetry between an intensity measurement for...
08/02/2011
7987056Mixed-library parallel gene mapping quantitative micro-array technique for genome-wide identification of trait conferring genes
The present disclosure concerns methods and compositions relating to mixed-library parallel gene trait mapping. In particular embodiments, the methods concern quantitative microarray hybridization techniques for genome-wide identification of trait conferring genes. ...
07/26/2011
7979446Computer-implemented biological sequence identifier system and method
A method of: submitting reference sequences to a taxonomic database to produce taxonomic results; and reporting a taxonomic identification based on the taxonomic results. The reference sequences are the output of genetic database queries that return a score for each...
07/12/2011
7970553Concurrent optimization in selection of primer and capture probe sets for nucleic acid analysis
Disclosed is a method of iteratively optimizing two (or more) interrelated sets of probes for the multi-step analysis of sets of designated sequences, each such sequence requiring, for conversion, at least one conversion probe (“primer”), and each converted sequ...
06/28/2011
7962291Methods and computer software for detecting splice variants
Methods and software products for analysis of alternative splicing are disclosed. In general the methods involve normalizing probe set or exon intensity to an expression level measurement of the gene. The methods may be used to identify tissue-specific alternative s...
06/14/2011
7925447Significance measure of structured clusters
The exemplary embodiments provide a computer implemented method, apparatus, and computer usable program code for calculating a probability. An input is received, wherein the input comprises a PQ tree. The leaf nodes of the PQ tree are counted to form a number of lea...
04/12/2011
7925448Method and system for determination of molecular interaction parameters
A method of determining kinetic parameters for a reversible molecular interaction between a ligand immobilized to a solid support surface and a binding partner to the ligand in solution, comprises sequentially, without intermediate regeneration or renewal of the imm...
04/12/2011
7917301Method and device for identifying a biological sample
The method and system for identifying a biological sample generates a data set indicative of the composition of the biological sample. In a particular example, the data set is DNA spectrometry data received from a mass spectrometer. The data set is denoised, and a b...
03/29/2011
7917306Methods and systems for generating cell lineage tree of multiple cell samples
A method of generating a cell lineage tree of a plurality of cells of an individual is provided. The method comprising: (a) determining at least one genotypic marker for each cell of the plurality of cells; and (b) computationally clustering data representing the at...
03/29/2011
7917304Spotter provided with spot pattern encryption function and detection device coping with spot pattern encryption
Plural probes spotted on a probe immobilization substrate are arranged such that the probes cannot be specified by a third party easily. When the plural probes are spotted on the probe immobilization substrate, a position where each probe is spotted is changed for e...
03/29/2011
7917305System and method for identifying a gapped permutation pattern
A system and method for identifying gapped permutation patterns, includes discovering all clusters in the input data sequence that occur with a predetermined gap. ...
03/29/2011
7917303Method for identifying combinations of motifs that do not mutate simultaneously in a set of viral polypeptide sequences comprising a putative drug binding site
Methods for identifying a motif or a combination of motifs having a Boolean state of predetermined mutations in a set of sequences including a) aligning a set of sequences of ordered motifs represented by a single-character code, b) comparing a reference sequence wi...
03/29/2011
7917302Determination of optimal local sequence alignment similarity score
Sequence alignment and sequence database similarity searching are among the most important and challenging task in bio informatics, and are used for several purposes, including protein function prediction. An efficient parallelisation of the Smith-Waterman sequence ...
03/29/2011
7904250Computer software to assist in identifying SNPS with microarrays
The present invention is a method to assist in the identification of single nucleotide polymorphisms (SNP) from microarray hybridization data. Data from hybridization protocols run on microarrays often have variations in the data resulting from variations in hybridi...
03/08/2011
7894999Systems and methods for identifying Replikin Scaffolds and uses of said Replikin Scaffolds
The present invention provides a new class of peptides related to rapid replication and high human mortality, and their use in diagnosing, preventing and treating disease including vaccines and therapeutics for emerging viral diseases and methods of identifying the ...
02/22/2011
7894998Method for identifying suitable nucleic acid probe sequences for use in nucleic acid arrays
Methods of identifying regions of a nucleic acid sequence suitable for use as probes in nucleic acid arrays, as well as compositions of matter for practicing such methods, are provided. The subject methods include: (a) providing a set of known, undesirable probe seq...
02/22/2011
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