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Attorney: Murphy; Matthew B.


Number of patents: 55
Last date: March 13, 2012

1    
NumberTitleIssue Date
8133702Engineered fluorescent dye labeled nucleotide analogs for DNA sequencing
Engineered nucleotide compositions, having polymerase interacting components that improve the interactivity of the polymerase and the nucleotide, particularly for nucleic acid sequencing applications. Compositions include the interactive polymerases along with the n...
03/13/2012
8058031Labeled nucleotide analogs and uses therefor
Labeled nucleotide analogs used in place of naturally occurring nucleoside triphosphates or other analogs in template directed nucleic acid synthesis reactions and other nucleic acid reactions, and various analyses based thereon, including DNA sequencing, single bas...
11/15/2011
7973146Engineered fluorescent dye labeled nucleotide analogs for DNA sequencing
Engineered nucleotide compositions, having polymerase interacting components that improve the interactivity of the polymerase and the nucleotide, particularly for nucleic acid sequencing applications. Compositions include the interactive polymerases along with the n...
07/05/2011
7968702Labeled reactants and their uses
Labeled reactant compositions, and particularly labeled nucleic acid reaction compositions, that include structural components that maintain potentially damaging labeling components sufficiently distal from the reactant portion of the molecule such that damaging eff...
06/28/2011
7901889Molecular redundant sequencing
Methods, systems and compositions where a target nucleic acid includes a registration sequence disposed therein for identification of the number or relative position of determined sequence from the template sequence. Particularly preferred aspects include a registra...
03/08/2011
7805081Methods and systems for monitoring multiple optical signals from a single source
Methods and systems for monitoring a plurality of different optical signals from a single source of such signals, where each such different optical signal is spatially separated from other such signals and directed to different detectors or locations upon a single d...
09/28/2010
7777013Labeled nucleotide analogs and uses therefor
Labeled nucleotide analogs used in place of naturally occurring nucleoside triphosphates or other analogs in template directed nucleic acid synthesis reactions and other nucleic acid reactions, and various analyses based thereon, including DNA sequencing, single bas...
08/17/2010
7767394Nucleotide compositions and uses thereof
The present invention relates to preparation of nucleotide compositions and uses thereof for conducting nucleic acid analyses. The compositions and methods embodied in the present invention are particularly useful for nucleic acid analyses that require high-resoluti...
08/03/2010
7763423Substrates having low density reactive groups for monitoring enzyme activity
Reactive surfaces, substrates and methods of producing and using such substrates and surfaces are provided. The substrates and surfaces provide low density reactive groups preferably on an otherwise non-reactive surface for use in different applications including si...
07/27/2010
7563574Methods, systems and compositions for monitoring enzyme activity and applications thereof
Methods of monitoring enzyme mediated reactions, and particularly nucleic acid synthesis reactions such as pyrosequencing methods that employ enzymatic reporter systems. The methods and systems provide elevated signal levels as compared to conventional pyrosequencin...
07/21/2009
7515333Nanotechnology-enabled optoelectronics
Nanomaterials for use in optoelectronic applications, and particularly nanocomposite optical amplifiers. nanocomposite optical amplifiers (NOAs), e.g., provided on integrated optical chips, for cost-effective broadband amplification across the entire clear-window of...
04/07/2009
7476503Apparatus and method for performing nucleic acid analysis
The present invention relates to optical confinements, methods of preparing and methods of using them for analyzing molecules and/or monitoring chemical reactions. The apparatus and methods embodied in the present invention are particularly useful for high-throughpu...
01/13/2009
6872645Methods of positioning and/or orienting nanostructures
Methods of positioning and orienting nanostructures, and particularly nanowires, on surfaces for subsequent use or integration. The methods utilize mask based processes alone or in combination with flow based alignment of the nanostructures to provide oriented and p...
03/29/2005
6695009Microfluidic methods, devices and systems for in situ material concentration
Methods of concentrating materials within microfluidic channel networks by moving materials into regions in which overall velocities of the material are reduced, resulting in stacking of the material within those reduced velocity regions. These methods, d...
02/24/2004
6632655Manipulation of microparticles in microfluidic systems
Arrays of flowable or fixed particle sets are used in microfluidic systems for performing assays and modifying hydrodynamic flow. Also provided are assays utilizing flowable or fixed particle sets within a microfluidic system, as well as kits, apparatus a...
10/14/2003
6620625Ultra high throughput sampling and analysis systems and methods
Ultra-high throughput systems and methods are used for sampling large numbers of different materials from surfaces of substantially planar library storage components. The systems and methods typically employ: microfluidic devices having integrated capilla...
09/16/2003
6613581Microfluidic analytic detection assays, devices, and integrated systems
Methods of detecting a component of interest, such as a protein, in a microfluidic system are provided. The methods include the use of a component-binding moiety specific to the component of interest, such as an antibody, to detect the component of intere...
09/02/2003
6613580Microfluidic systems and methods for determining modulator kinetics
Methods, systems, kits, and apparatus for calculating kinetic and concentration information in microscale systems are provided. Dwell times for access by a microfluidic system are varied and the resulting modulation of signal profile information used to p...
09/02/2003
6472141Kinase assays using polycations
Methods, systems, kits for carrying out a wide variety of different assays that comprise providing a first reagent mixture which comprises a first reagent having a fluorescent label. A second reagent is introduced into the first reagent mixture to produce...
10/29/2002
6468763Optical detection of transmembrane potential changes
Compositions for monitoring transmembrane potential across cellular membranes. The compositions typically comprise a cell having a plasma membrane that comprises a first leaflet and a second leaflet, the membrane comprising first and second membrane assoc...
10/22/2002
6436646Methods of identifying nucleic acid sequences using polycations
Methods, systems, kits for carrying out a wide variety of different assays that comprise providing a first reagent mixture which comprises a first reagent having a fluorescent label. A second reagent is introduced into the first reagent mixture to produce...
08/20/2002
6384401Method and apparatus for detecting low light levels
A method and apparatus for measuring very low light signals including integrating a signal from a photo diode, avalanche photo diode, photomultiplier tube or the like, digitally sampling the integrator output more than two times during each integration pe...
05/07/2002
6379974Microfluidic systems
The present invention generally provides microfluidic devices and systems that utilize electrokinetic material transport systems to selectively control and direct the transport of materials through and among complex arrangements of integrated, interconnec...
04/30/2002
6379884Methods and systems for monitoring intracellular binding reactions
Intracellular binding reactions, and particularly DNA/DNA binding protein reactions are detected in situ, using intracellular fluorescence polarization detection. The methods comprise providing a biological cell having at least a first component of a bind...
04/30/2002
6337740Microfluidic devices for electrophoretic analysis of materials
The present invention provides a microfluidic system for fast, accurate and low cost electrophoretic analysis or materials in the fields of chemistry, biochemistry, biotechnology, molecular biology and numerous other fields. Light from periodically spaced...
01/08/2002
6322683Alignment of multicomponent microfabricated structures
Microfluidic devices are fabricated by fabricating structures that are used to align elements that are to be attached to the devices or tools that are to be used in further fabrication steps on those devices. Elements to be attached include additional sub...
11/27/2001
6316201Apparatus and methods for sequencing nucleic acids in microfluidic systems
The present invention is generally directed to microfluidic systems and methods of using such systems in the determination of the nucleotide sequence of target nucleic acid sequences (referred to herein as the "target"). In particular, the present inventi...
11/13/2001
6287520Electropipettor and compensation means for electrophoretic bias
The present invention provides for techniques for transporting materials using electrokinetic forces through the channels of a microfluidic system. The subject materials are transported in regions of high ionic concentration, next to spacer material regio...
09/11/2001
6287774Assay methods and system
Methods, systems, kits for carrying out a wide variety of different assays that comprise providing a first reagent mixture which comprises a first reagent having a fluorescent label. A second reagent is introduced into the first reagent mixture to produce...
09/11/2001
6274089Microfluidic devices, systems and methods for performing integrated reactions and separations
Microfluidic devices for performing integrated reaction and separation operations. The devices include a planar substrate having a first surface with an integrated channel network disposed therein. The reaction region in the integrated microscale channel ...
08/14/2001
6251343Microfluidic devices and systems incorporating cover layers
The present invention provides microfluidic devices that comprise a body structure comprising at least a first microscale channel network disposed therein. The body structure has a plurality of ports disposed in the body structure, where each port is in f...
06/26/2001
6235175Microfluidic devices incorporating improved channel geometries
The present invention generally provides microfluidic devices which incorporate improved channel and reservoir geometries, as well as methods of using these devices in the analysis, preparation, or other manipulation of fluid borne materials, to achieve h...
05/22/2001
6221226Methods and systems for monitoring and controlling fluid flow rates in microfluidic systems
The present invention generally provides methods and systems for monitoring and controlling electroosmotic flow rates in microfluidic systems. Generally, such methods and systems monitor flow rates in electroosmotically driven microfluidic systems by flow...
04/24/2001
6167910Multi-layer microfluidic devices
The present invention provides multi-layer microfluidic systems, by providing additional substrate layers, e.g., third, fourth, fifth and more substrate layers, mated with the typically described first and second layers. Microfabricated elements, e.g., gr...
01/02/2001
6150119Optimized high-throughput analytical system
Throughput rates for microfluidic serial analysis systems are optimized by maximizing the proximity and speed with which multiple different samples may be serially introduced into a microfluidic channel network. Devices are included that include optimized...
11/21/2000
6123798Methods of fabricating polymeric structures incorporating microscale fluidic elements
The present invention generally provides improved methods of fabricating polymeric microfluidic devices that incorporate microscale fluidic structures, whereby the fabrication process does not substantially distort or deform such structures. The methods o...
09/26/2000
6107044Apparatus and methods for sequencing nucleic acids in microfluidic systems
The present invention is generally directed to microfluidic systems and methods of using such systems in the determination of the nucleotide sequence of target nucleic acid sequences (referred to herein as the "target"). In particular, the present inventi...
08/22/2000
6086740Multiplexed microfluidic devices and systems
Multiplexed microfluidic devices include a plurality of modular microfluidic elements, all of which are attached to a common frame or substrate, which itself includes one or more common input elements that are connected to corresponding input elements wit...
07/11/2000
6071478Analytical system and method
An analytical or preparatory system comprised as a base unit, an adapter, and a substrate. The adapter is attached to an attachment region on the base unit, and the substrate is attached to an attachment region on the adapter. The adapter permits the base...
06/06/2000
6048498Microfluidic devices and systems
Microfluidic apparatus which include a planar device and polymeric holder assembly are provided. The polymeric holder assembly includes a cavity disposed through the holder, providing optical access to the top and bottom of the planar device when the devi...
04/11/2000
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